AT3G27310.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : plant UBX domain-containing protein 1 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a protein that contains a UBX domain and regulates AtCDC48 by inhibiting its ATPase activity and by promoting the disassembly of the active hexamer. Phenotypic analysis of pux1 plants revealed that the loss of PUX1 accelerated the growth of various plant organs including roots and inflorescence shoots. AtCDC48 and SYP31 colocalize at the division plane during cytokinesis and to interact in vitro and in vivo. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
plant UBX domain-containing protein 1 (PUX1); CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012); Has 392 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 47; Plants - 86; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:10087360..10089077 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28503.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.70 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.71 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 251 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFVDDPSLHT LKRRRLEITD SMEASSSAQA KIADMREKLG REVRVFETSS ISQRPSQVSS ADDESDDFYE FTPADFYRLL ATKKEDKSLK TRKIREAEEA 101: ARRSKLTKAV IRVRFPDNHT LEATFHPSEK IQGLIDLVKR VVAHPDVPFY LYTTPPKKQI KDFSQDFYSA GFVPGAIVYF SNDQPKDDGG SSTPYLNEEI 201: LSLKDLEAMT KAVEPVESSS EPATVDSSAV PVEHERKSTE KKTTKPKWFK M |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)