AT3G23570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23600.1); Has 1694 Blast hits to 1693 proteins in 498 species: Archae - 20; Bacteria - 786; Metazoa - 71; Fungi - 502; Plants - 214; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8458052..8459608 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26531.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.17 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||
| Length | 239 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSGHQCTENP PDLDPTSGSG HVEKLGNLDT YVCGSTHSKL AVLLVPHVFG YETPNLRKLA DKVAEAGFYA VVPDFFHGDP YNPENQDRPF PIWMKDHELE 101: KGFEESKPIV EALKNKGITS IGAAGFCWGA KVAVELAKEK LVDATVLLHP ARVTVDDIKE VNLPIAVLGA EIDQVSPPEL VRQFEDILAS KPQVKSFVKI 201: FPRCKHGWTV RYNENDPSEV EAAMEAHKDM LAWLIDYLK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)