AT3G23510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.644 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cyclopropane-fatty-acyl-phospholipid synthase | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:8428071..8433159 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 97886.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.43 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||
| Length | 867 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKVAVIGSGI SGLGSAYVLA NQGVKEVVLY EKEESLGGHA KTVRFDGVDL DLGFMVFNRV TYPNMIEFFE NLGVEMEVSD MSFAVSLDNG KGCEWGSRNG 101: VSGLFAQKKN VLNPYFWQMI REIVRFKEDV LNYIEKLEGN PDIDRKETLG EFLNTRGYSE LFQQAYLVPI CGSIWSCPSD GVLSFSAYSV LSFCCNHHLL 201: QIFGRPQWLT VAGRSQTYVA KVRAELERLG CKIRTSCDVK SVSTSENGCV TVTSGDGSEE VFDRCILAMH APDALRLLGE EVTFDESRVL GAFQYVYSDI 301: YLHHDIDLMP RNKAAWSAWN FLGSTEKKVC VTYWLNILQN LGENSEPFFV TLNPDETPKK ALLKWTTGHP VPSVAASIAS QELHQIQGKR NIWFCGAYQG 401: YGFHEDGLKA GMAAARGLLG KETALLNNPR HMVPSLTETG ARLFVTRFLG QFISTGSVTI LEEGGTMFTF GGKDSTCPLK SILKIHSPQF YWKVMTQADL 501: GLADAYINGD FSFVDKESGL LNLIMILIAN RDTKSNLTKK RGWWTPMFLT AGLASAKYFL KHVSRQNTLT QARRNISRHY DLSNELFGLF LDDTMTYSSA 601: VFKSDDEDLR TAQMRKISLL IDKARIEKDH EVLEIGCGWG TLAIEVVRRT GCKYTGITLS IEQLKYAEEK VKEAGLQDRI TFELRDYRQL SDAHKYDRII 701: SCEMLEAVGH EFMEMFFSRC EAALAEDGLM VLQFISTPEE RYNEYRLSSD FIKEYIFPGA CVPSLAKVTS AMSSSSRLCI EHVENIGIHY YQTLRLWRKN 801: FLERQKQIMA LGFDDKFVRT WEYYFDYCAA GFKTRTLGDY QLVFSRPGNV AAFADSYRGF PSAYCVS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)