AT3G20350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50660.1); Has 15095 Blast hits to 11224 proteins in 1051 species: Archae - 223; Bacteria - 1586; Metazoa - 7000; Fungi - 1255; Plants - 746; Viruses - 40; Other Eukaryotes - 4245 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7096602..7099372 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77099.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.82 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.97 | ||||||||||||||||||||||||||||
| Length | 673 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKFTGKSNLT ATLPATVPNI RDIHRRRARK PSFTRQRRSG VSVRRLSRPE TPQLKSKVED QNIERCGGVE DGDNEDDDCN KMRCQERSRS VRPDTVRKLA 101: AGVWRLRVPD AVSSGGDKRS KDRLRFQETA GPAGNLGPLF YYHHHDDKHS GFQSNNSRNK HSRFLCKHEP SVPFPHCAME GATKWDPICL DTRDDVHQIY 201: TNVKWNNQQV NDVSLASSIE LKLQEARACI KDLESEKRSQ KKKLEQFLKK VSEERAAWRS REHEKVRAII DDMKADMNQE KKTRQRLEIV NSKLVNELAD 301: SKLAVKRYMH DYQQERKARE LIEEVCDELA KEIEEDKAEI EALKSESMNL REEVDDERRM LQMAEVWREE RVQMKLIDAK VTLEEKYSQM NKLVGDMEAF 401: LSSRNTTGVK EVRVAELLRE TAASVDNIQE IKEFTYEPAK PDDILMLFEQ MNMGENQDRE SEQYVAYSPV SHASKAHTVS PDVNLINKGR HSNAFTDQNG 501: EFEEDDSGWE TVSHSEEHGS SYSPDESIPN ISNTHHRNSN VSMNGTEYEK TLLREIKEVC SVPRRQSKKL PSMAKLWSSL EGMNGRVSNA RKSTVEMVSP 601: ETGSNKGGFN TLDLVGQWSS SPDSANANLN RGGRKGCIEW PRGAHKNSLK TKLIEAQIES QKVQLKHVLE HKI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)