AT3G15340.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : proton pump interactor 2 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Hypothetical protein similar to PPI1, a protein that interacts with the plasma membrane H+ ATPase AHA1 | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
proton pump interactor 2 (PPI2); INVOLVED IN: regulation of proton transport; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 26949 Blast hits to 17849 proteins in 1448 species: Archae - 129; Bacteria - 3780; Metazoa - 11316; Fungi - 2383; Plants - 1083; Viruses - 91; Other Eukaryotes - 8167 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:5160016..5162305 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67327.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.81 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.82 | ||||||||||||||||||||||||||||||||||||
| Length | 589 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGAQIILSEG FEVVPPPEMN DLVLFGSNQS VSSCDVSTVT TEDGTVFSGD SSPGGATEED FPEEKPFSFY FVKQPAYDDP EIKAKIDEAG HEINRYNKDR 101: IVVSNAQESE KAEILSLFGQ MKSLVSKSEG YRVVIEEKKM EFDALHESLR NLRCSTSDQL CFSKEELDHL IYIAHYQIEH GSIGFEEEDW VLKETEKADG 201: IVLSEDSLAE KEASINRVKS MAVELNEVKK ELDAITWKIN HLSDKVGKSQ NNLRVLDVKK AHILEERDRS YERIKMLRIQ RDKGKAAFYQ SLPVMRKARE 301: LAASGNVRDL EVFASSEADR FMTQWNDDKA FRDDYVKRIS PSLCERQLNQ DGRIKDPEVQ VVWEKKVPVK GGEKVHETNR EDSSSNSSQY GSVITDKRKK 401: ETRKKAMDFN RSSAEESDVT DLEFSVYEKP KKEEEEVDEE TLKEREREEQ LEKARLAMER KRKLQEKAAA KAAIRAQKEA EKKLKECEKK AKKKAAANSS 501: SPSESDHSQE VTKDLEKVRT LAVSGKEKHQ KERSLFPKQR SFRYKHRGRG TEALPKAILN RRKAHKYWVW GLSSAALAVA LFLVVLLLR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)