AT3G14870.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.946 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF641) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF641); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT1G53380.3); Has 436 Blast hits to 433 proteins in 67 species: Archae - 9; Bacteria - 8; Metazoa - 66; Fungi - 13; Plants - 283; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:5004159..5005586 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 54741.40 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.31 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||
| Length | 475 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNLQMESVKP LDVVSSGKGK LRRTFAKVIN MKKLTGVVPE GNNKVERVKK SQEKVKLDKD LAKNAANLSE SFDKLEEEYE KRLAMEALLA KLFATISSIK 101: SGYAQLQYAQ SPYDPNGIQK ADNLVVAELK TLSELKQSFL KKQLDPNPDR TLVLAEIQEL RSVLKTYEIM GKKLECQLKL KDSEIIFLKE KFQESMTQNK 201: LMEKRLNQSG QLCNPLDHNL HLSAVSSTHF VTYLHHTVKS IRGFVKLMVE QMKLAAWDID MAAELIQPDV LYYKQDHKCF ALEHYVCKIM LEAFQLPYFS 301: NESSKKTSRE DKAMFFERFT ELRSMKPREY LASRPKSRLA KFCRTKYLQL IHPKMEQAFF GHLHQRNQVT AGEFPETSLC TAFLEMAKRV WLLHCLAFSF 401: DPEASIFQVS RGCRFSEVYM KSVSEEAFFS PEQEESSSET EPGVAFTVVP GFRIGKTTIQ CEVYLSRSCQ RRQSR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)