AT3G06550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-acetyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 268 Blast hits to 266 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 107; Fungi - 39; Plants - 104; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2039317..2042664 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63615.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.68 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.37 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 545 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASSSPVTPG LMSVVFGIVP VIVAWLYSEY LHYAKYSVSA KTRHSDVNLV EIAKDFVKED DKALLIEDGG GLQSASPRAK GPTTHSPLIR FVLLDESFLV 101: ENRLTLRAII EFAVLMVYFY ICDRTDVFNS SKKSYNRDLF LFLYFLLIIV SAITSFTIHT DKSPFSGKAI MYLNRHQTEE WKGWMQVLFL MYHYFAAAEY 201: YNAIRVFIAC YVWMTGFGNF SYYYIRKDFS LARFAQMMWR LNFLVIFSCI VLNNSYMLYY ICPMHTLFTL MVYGALGIMS KYNEMGSVIA AKFFACFVVV 301: IIVWEIPGVF EWIWSPFTLL MGYNDPAKPQ LPLLHEWHFR SGLDRYIWII GMLYAYYHPT VESWMDKLEE AEMKFRVAIK TSVALIALTV GYFWYEYIYK 401: MDKLTYNKYH PYTSWIPITV YICLRNITQS FRGYSLTLLA WLGKITLETY ISQFHIWLRS GVPDGQPKLL LSLVPDYPLL NFMLTTSIYV AISYRLFELT 501: NTLKTAFIPT KDDKRLVYNT ISALIICTCL YFFSFILITI PQKLV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)