AT3G05345.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Chaperone DnaJ-domain superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 10844 Blast hits to 10844 proteins in 2367 species: Archae - 96; Bacteria - 5912; Metazoa - 1330; Fungi - 441; Plants - 721; Viruses - 3; Other Eukaryotes - 2341 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:1522449..1523847 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27648.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.75 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||
| Length | 244 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MECLRVFASV PKISFFSNSR YSTSQRFIPS CRGKNREDPL SSSSPYSILG VEPSCSSSEL KAAFRAKVKQ YHPDVNKDGS NSDIMIRRII QAYEMLTNYS 101: RSEIIEGECL DPFDHPECEA LDVFVNEVLC VGKRCSYPCF ETASHVFSCD SSGTARAMSQ GHGEDYRVQS AVNQCPRNCI HYVTPSQRII LEELLDSVVD 201: KPYDCSAEAE FLYALIVKAK FENNRYQKPK KKQPESSGKH VDWF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)