AT3G01450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.994 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARM repeat superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G14790.1); Has 261 Blast hits to 260 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 10; Plants - 111; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:169903..171379 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36349.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.85 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||
| Length | 326 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAKALKDLK NLPVSERNID YKTKLLVGKM NGTAEDKPPQ NSVPFDHNHP KGDEIEKPEA ERVIVEIEYI ESKDLNNVTQ VDAVLKSLVT ELDSKDWVLV 101: CDALNTIRRL SIFHKEEMLH MLEKVILFIV KSLKNPRSAV SKTACMTSAD IFSSYNDHTI DQLDLLLTQL LLKSSQDKRF VCEAAEKALV AMTAHVSPAL 201: LLPKLQPFLK NRNPRIRAKA STCFSRCVPR LGIEGIREYG IEKLVQAASS QLSDQLPESR EAARAVLLEL QTVYKKTTNV EPKEEHPEPV TWQIFCQSNL 301: SPLSAQAVIR VTNVAGVARE GLVAGS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)