AT2G46950.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.625 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 709, subfamily B, polypeptide 2 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP709B | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 709, subfamily B, polypeptide 2 (CYP709B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 3 (TAIR:AT4G27710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:19289466..19291541 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65233.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.54 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 572 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLFCSVRILF IISSKQLVLI SETEVTTTLT LHTTHKIESP TANPPQSKKN LFVIRMELLS TINLLAIALV LLVVPKIYGA CRILVWRPWM LSRRFKKQGI 101: SGPKYRILYG NLREIRKMKN EAKLMVLDPN SNDIVPRVLP HLQQWKSQYG ETFLYWQGTD PRLCISDHEL AKQILSNKFV FFSKSKTKPE ILKLSGNGLI 201: FVNGLDWVRH RRILNPAFSM DKLKLMTQLM VDCTFRMFLE WKKQRNGVET EQFVLISREF KRLTADIIAT AAFGSSYAEG IEVFKSQLEL QKCCAAALTD 301: LYFPGIQYLP TPSNLQIWKL DMKVNSSIKR IIDARLTSES KDYGNDLLGI MLTAASSNES EKKMSIDEII EECKTFFFAG HETTANLLTW STMLLSLHQD 401: WQEKLREEVF NECGKDKIPD AETCSKLKLM NTVFMESLRL YGPVLNLLRL ASEDMKLGNL EIPKGTTIIL PIAKMHRDKA VWGSDADKFN PMRFANGLSR 501: AANHPNALLA FSMGPRACIG QNFAIMEAKT VLAMILQRFR LNLSADYKHA PADHLTLQPQ YDLPVILEPI DG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)