AT2G46930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 ASURE: extracellular What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Pectinacetylesterase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G62060.1); Has 557 Blast hits to 549 proteins in 96 species: Archae - 0; Bacteria - 48; Metazoa - 118; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:19283625..19286090 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45946.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.29 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 416 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSVLRIAAA IFWLWLFIVL GVIGSGNVRD TDDEISLLES QLVVTSPSQL LMVPLTLIQA AASKGAVCLD GTLPGYHLHP GSGSGANRWL IQLEGGGWCN 101: TRRSCIFRKT TRRGSSNHME KVLAFTGILS NKSNENPDFF NWNRVKLRYC DGASFTGDSQ DESSQLYYRG QRIWHSAMEE LLSKGMQKAE QALLSGCSAG 201: GLASILHCDQ FKELFPGTTT VKCLSDAGMF MDAVDVSGGH SLRKMFQGVV TVQNLQKELS TACTKHLDPT SCFFPQNLVS GIKTPMFLLN AAYDAWQVQE 301: SLAPPSVDLS GSWKACKSDH SHCNSSQIQF FQDFRTHMVD AVKSFATSTH NGVFINSCFA HCQSERQDTW YAPDSPTLHG KTVAESVGDW YFDRTTVKAI 401: DCPYPCDKTC HNLIFK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)