AT2G46520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.500 nucleus 0.500 ASURE: cytosol,nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative; FUNCTIONS IN: protein transporter activity, importin-alpha export receptor activity, binding; INVOLVED IN: intracellular protein transport, cell proliferation, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), CAS/CSE, C-terminal (InterPro:IPR005043), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 1154 Blast hits to 1141 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 461; Fungi - 384; Plants - 163; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:19096867..19099785 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 108663.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.29 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 972 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEWNRETLVF LSQCFLNTLS PIPEPRRTAE RALSDAADQA NYGLAVLRLV AEPAIDEQTR HAAAVNFKNH LRSRWHPAGD SGISPIVDSE KEQIKTLIVS 101: LMLSASPRIQ SQLSEALTVI GKHDFPKAWP ALLPELIANL QNAALAGDYV SVNGILGTAS SIFKKFSYEY RTDALFVDLK YCLDNFAAPL TEIFLKTSSL 201: IDSAASSGGS PPILKPLFES QRLCCTIFYS LNFQDLPEFF EDHMKEWMGE FKKYLSSNYP ALESTEEGLT LVDDLRAAIC ENINHYIEKN EEEFQGFLNE 301: FASVVWTLLR DVSKSPSRDQ LATTAIKFLT SVSTSVHHAL FAGDNVIKEI CQSIVIPNVS LRVEDEEIFE MNYIEFIRRD MEGSDVDTRR RIACELLKGL 401: ATNYKTQVTE VVSLEIQRLL SSFSANPSAN WKDKDCAIYL VVSLSTKKAG GASVSTDLID VQNFFANIIL PELQSRDVNS FPMLKAGSLK FLTMFRSHIP 501: KPFAMQLFPE LVRFLKAESN VVHSYAASCI EKLLLVKEEG ARGNRYAAGD LSPFLLQLMT NLFDALKFPE SEENQYLMKC IMRVLGVADI SAEVAGPCIG 601: GLTSILSEVC KNPKNPIFNH YLFESVAVLV RRACERDISL ISAFETSLFP SLQMILANDI TEFLPYGFQL LAQLVELNRP TLSPNYMQIF LLLLSPESWK 701: RSGNVPALVR LLQAFLQKAP HEVTQENRLS QVLGIFEKLV ASPSTDEQGF YILNTIIENL DYSVIAPYMK GVWSALFTRV QNKKTVKFQK SLVIFMSLFL 801: VKHGQAYLVE TMNTVQPNII TAIVEHFWIP NLKLIMGSME VKLTAVAATR LICETPALLD PSAAKLWGKM LDSIVTLVSR PEQERVLDEP EMPEISENVG 901: YTAAFVKLHN AGKKEEDPLK DIKDPKQFLV ASVSRLSSAS PGRYPQIIGE NLEQANQTAL IQLCNAYNCG IA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)