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AT2G41945.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EMBL:BT014953EMBL:BT015388EMBL:CP002685EnsemblPlants:AT2G41945
EnsemblPlants:AT2G41945.1entrez:2745591ExpressionAtlas:Q6GKW1GeneID:2745591
GO:GO:0016021Gramene:AT2G41945.1hmmpanther:PTHR34459hmmpanther:PTHR34459:SF2
HOGENOM:HOG000006107PhylomeDB:Q6GKW1Proteomes:UP000006548RefSeq:NP_973663.1
TAIR:AT2G41945TMHMM:TMhelixUniGene:At.47776UniProt:Q6GKW1
Coordinates (TAIR10) chr2:-:17511071..17512898
Molecular Weight (calculated) 17053.50 Da
IEP (calculated) 9.59
GRAVY (calculated) -0.11
Length 158 amino acids
Sequence (TAIR10)
(BLAST)
001: MGTRQVYEEK LRRGNLDYDP TMNPGLGSAR CPRCLSLLNP NSEKGEWTIT PVLHDAAAVA GSGIGGLLSA VHAFNTGIPY LQNRFSGSKR LSFLVGVPLL
101: LVYSGVGAAF GGYALPKFAQ LTVTSYYASS SASHYGISML TRRIEEAHLS RTQKEEVK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)