AT2G39080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 818 Blast hits to 811 proteins in 372 species: Archae - 18; Bacteria - 637; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:16309981..16312475 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38212.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.14 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||
| Length | 351 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGFISCISFP TINSRILSTH HFSKHSTSAS SSYSLKFALR RQEDKPKVSF FLPLTSSLMA TPIQASSSST IGETSDGLKV QSHVSIGAND LLIVGPGVLG 101: RLVAEQWRQE HPESQIFGQT VTTNHHGELE NLGIKPSLKG TEYGGKFSYV IFCAPPSQSA DYAGEVRNAA SNWNGEGSFL FTSSSAPYDC FDNGECNEDS 201: PVVPLGKSPR TDVLLKAEKV VLECGGTVLR LAGLYTETRG AHTYWLSKET IDARPDHILN LIHYEDAASL AVAIMKKKAG ARIFLGCDNH PLSRQEVMDL 301: MAQSGKFDKK FKGFTSTSGP LGKKLNNSKT RAEIGWEPKY PSFAQFFGVS T |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)