AT2G37230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Tetratricopeptide repeat (TPR)-like superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02060.1); Has 41954 Blast hits to 13568 proteins in 300 species: Archae - 4; Bacteria - 36; Metazoa - 406; Fungi - 591; Plants - 39794; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:15637177..15639450 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85709.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.16 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 757 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAFISRSKRY QSKARVYLSL PRSSNSSLFS LPRLFSTIEE TQTPANANPE TQSPDAKSET KKNLTSTETR PLRERFQRGK RQNHEKLEDT ICRMMDNRAW 101: TTRLQNSIRD LVPEWDHSLV YNVLHGAKKL EHALQFFRWT ERSGLIRHDR DTHMKMIKML GEVSKLNHAR CILLDMPEKG VPWDEDMFVV LIESYGKAGI 201: VQESVKIFQK MKDLGVERTI KSYNSLFKVI LRRGRYMMAK RYFNKMVSEG VEPTRHTYNL MLWGFFLSLR LETALRFFED MKTRGISPDD ATFNTMINGF 301: CRFKKMDEAE KLFVEMKGNK IGPSVVSYTT MIKGYLAVDR VDDGLRIFEE MRSSGIEPNA TTYSTLLPGL CDAGKMVEAK NILKNMMAKH IAPKDNSIFL 401: KLLVSQSKAG DMAAATEVLK AMATLNVPAE AGHYGVLIEN QCKASAYNRA IKLLDTLIEK EIILRHQDTL EMEPSAYNPI IEYLCNNGQT AKAEVLFRQL 501: MKRGVQDQDA LNNLIRGHAK EGNPDSSYEI LKIMSRRGVP RESNAYELLI KSYMSKGEPG DAKTALDSMV EDGHVPDSSL FRSVIESLFE DGRVQTASRV 601: MMIMIDKNVG IEDNMDLIAK ILEALLMRGH VEEALGRIDL LNQNGHTADL DSLLSVLSEK GKTIAALKLL DFGLERDLSL EFSSYDKVLD ALLGAGKTLN 701: AYSVLCKIME KGSSTDWKSS DELIKSLNQE GNTKQADVLS RMIKKGQGIK KQNNVSL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)