AT2G37100.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protamine P1 family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protamine P1 family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: chromosome organization; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03110.1); Has 306 Blast hits to 290 proteins in 70 species: Archae - 0; Bacteria - 11; Metazoa - 127; Fungi - 26; Plants - 97; Viruses - 12; Other Eukaryotes - 33 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:15591147..15592040 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 33758.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 11.15 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.08 | ||||||||||||||||||||||||
| Length | 297 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRFSSSRPVS SPGRTENPPL LMRFLRTKSR SRSRSRSRRP IFFRRKNASA AAETQEPTSP KVTCMGQVRI NRSKKPKPET ARVSGGATER RRQSRRCGWV 101: KNAFPCHSFT GIIKPTCFSP VWRKWKSFSH ASFSKKSEKR SSSSRSEPIF GRSTVEPEEP EETRKEENQE EEASSCKSFT ATPPRNAFLL TRCRSAPYRS 201: PSSANSLFED QEETNKAPFQ RHASSENVSV SEEPKTSVTE TTERLEDSRR ESAASEEPKR SVLGSPRQCL ILTRCNSEPA RLVPEMGYRQ NPRLGFT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)