AT2G36070.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : translocase inner membrane subunit 44-2 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
translocase inner membrane subunit 44-2 (TIM44-2); FUNCTIONS IN: protein-transmembrane transporting ATPase activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 44-1 (TAIR:AT2G20510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:15145119..15147895 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53648.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.26 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.78 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 469 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASRKLVRDL LITKQPLLQQ LVHQRRVGAR LGLLQGNGFA SHRRFSVFSE FSKKIRGEAD SNPEFQKTVK EFKERAEELQ GVKEDLKVRT KQTTEKLYKQ 101: GQGVWTEAES VAKKVSSSVK DKFSAATEEV KESFKLGKEE SAESASSSGT GTTEGEKQQQ QSGSTEEQDT FFGKFKSSIS SPKLSEAFHK PLDFAKKGLD 201: IVKDELRGNP SKRKHLEYTP PPPFTGERST RTEMVIMPTK QSKWQKKWES LREKMQGYPV FKRLSGMSEP VVNKSQEIAE DVREKWETSD NPIVHKIQDM 301: NERIFEETGS ASTYKEIRRR DPSFSLPDFV SEIQEAIRPV LNAYSKGDAK TLKKYCSKEL IERCTAEHRA FTSQGYFFDH KLLHVSEVDI QETKMMGTTP 401: VIIVRFQTQE IFCVRDQDGK IKEGGQDTIH TVYYDWAMQQ VDAAELGEDA IYPIWRLREM LRAGVQALI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)