AT2G32270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : zinc transporter 3 precursor | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. also response to iron deficiency. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
zinc transporter 3 precursor (ZIP3); FUNCTIONS IN: zinc ion transmembrane transporter activity; INVOLVED IN: zinc ion transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 5 precursor (TAIR:AT1G05300.1); Has 2134 Blast hits to 1919 proteins in 341 species: Archae - 2; Bacteria - 237; Metazoa - 455; Fungi - 672; Plants - 540; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13704278..13706612 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36045.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.26 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.63 | ||||||||||||||||||||||||||||||||
| Length | 339 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKTKNVKLLF FFFSVSLLLI AVVNAAEGHS HGGPKCECSH EDDHENKAGA RKYKIAAIPT VLIAGIIGVL FPLLGKVFPS LRPETCFFFV TKAFAAGVIL 101: ATGFMHVLPE AYEMLNSPCL TSEAWEFPFT GFIAMIAAIL TLSVDTFATS SFYKSHCKAS KRVSDGETGE SSVDSEKVQI LRTRVIAQVL ELGIIVHSVV 201: IGISLGASQS PDAAKALFIA LMFHQCFEGL GLGGCIAQGK FKCLSVTIMS TFFAITTPIG IVVGMGIANS YDESSPTALI VQGVLNAASA GILIYMSLVD 301: LLAADFTHPK MQSNTGLQIM AHIALLLGAG LMSLLAKWA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)