AT2G32170.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.959 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: N2227-like (InterPro:IPR012901); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G32160.3); Has 531 Blast hits to 480 proteins in 200 species: Archae - 0; Bacteria - 4; Metazoa - 150; Fungi - 210; Plants - 66; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13666476..13670924 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57714.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.90 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||||||
| Length | 504 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSPSEMTET APAIMTTESE RIESSRELVD NEEEEKIRRQ KKLEEALEAK SLRRIISAYL NYPEASEEDL KRWERSYRKL SPAHKALVPH YPMKFQRLRR 101: CISANSYFIF NMLQAFEPPI DLSQELDGCE DSNLDCAPHE RYTLDERHDS SCQPALTNSC TYKEESKHIR DPITGVSIEE LQRKEAHDHS PKDDSADTRI 201: NDKTCDCHEG QLNHDHGSVS FSSHDWLDSS LQTHVPLVDV DKVRCIIRNI VRDWAAEGQR ERDQCYKPIL EELDSLFPDR LKESTPPACL VPGAGLGRLA 301: LEISCLGFIS QGNEFSYYMM ICSSFILNYT QVPGEWTIYP WIHSNCNSLS DNDQLRPIAI PDIHPASAGI TEGFSMCGGD FVEVYNESSH AGMWDAVVTC 401: FFIDTAHNVI EYIQTISKIL KDGGVWINLG PLLYHFADTY GHENEMSIEL SLEDVKRVAS HFGFVIEKER TIETTYTTNP RAMMQNRYYT AFWTMRKKCA 501: ITTT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)