AT2G30750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.834 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 71, subfamily A, polypeptide 12 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 71, subfamily A, polypeptide 12 (CYP71A12); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 13 (TAIR:AT2G30770.1); Has 34196 Blast hits to 33993 proteins in 1718 species: Archae - 48; Bacteria - 4046; Metazoa - 11921; Fungi - 7292; Plants - 9674; Viruses - 3; Other Eukaryotes - 1212 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:13099486..13101389 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56858.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.45 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||
| Length | 503 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSNIQEMEMI LMVSLCLTTL ITLFLLKQFL KRTANKVNLP PSPWRLPLIG NLHQLSLHPH RSLHSLSLRY GPLMLLHFGR VPILVVSSGE AAQEVLKTHD 101: LKFANRPRSK AVHGLMNGGR DVVFGPYGEY WRQMKSVCIL NLLTNKMVAS FEKIREEELN EMIKKLEKAS SSSSSENLSE LFVTLPSDVT SRIALGRKHS 201: EDETARDLKK RVRQIMELLG EFPIGDYVPA LAWIDRINGF NARIKEVSQG FSDLMDKVVQ EHLEAGNHKE DFVDILLSIE SEKSIGFQAQ RDDIKFMILD 301: MFIGGTSTSS TLLEWIMTEL IRNPNVMKKL QDEIRSTIRP HGSYIKEKDV ENMKYLKAVI KEVFRVHPPL PLILPRLLSE DVKVKGYNIA AGTEVIINAW 401: AIQRDPAIWG PDAEEFKPER HLDSTLDYHG KDLNFIPFGS GRRICPGINL ALGLVEVTVA NLVGRFDWRA EAGPNGDQPD LTEAFGLDVC RKFPLIAFPS 501: SVI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)