AT2G26470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 (InterPro:IPR003738); Has 3646 Blast hits to 3636 proteins in 1001 species: Archae - 41; Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44; Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:11259316..11262362 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55097.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.52 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||||||||||
| Length | 487 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCGRTRCTLR PDDVPRASHR HTVPTRFLHL DRYRPSYNVA PGSYIPVLRR DNEEVVGDGV VVHCMKWGLV PSFTKKTDKP DFFKMFNARS ESVAEKASFR 101: RLLPKNRCLV AVDGFYEWKK EGSKKQPYYI HFEDGRPLVF AALFDTWQNS GGETLYTFTI LTTASSSALQ WLHDRMPVIL GDKDSIDTWL DDPSTTKLQP 201: LLSPYEKSDL VWYPVTSAIG KPTFDGPECI QQIPLKTSQN SLISKFFSTK QPKTDEGDKE TKSTDANIIV DLKKEPTAEK DTFSDSIKKI EELDGEKDMS 301: NVAKNLEFQE IVKAEPFVED NSAVASLPEP VKNDVQEGTK EEGKSLKTGL TKETGESSAS IPAESYILDL QRISKEEPET QSHHFFTADE RLNQLHEAVE 401: DIPGNENQKT VLTSPTTKEG GLVFSEKSGT KRDYEVFSAQ EKPQKHYERL QNVKSSGKQG KMHGMGKSNI KKSKETQSTL HFFFDEK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)