AT2G24130.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.950 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich receptor-like protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:10258148..10261220 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 107798.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.56 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 980 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDYCSLLVVS FLITVMTVLA SKENDHELIK NPQNSLSSWI SSSSSSSSML VDVCNWSGVK CNKESTQVIE LDISGRDLGG EISPSIANLT GLTVLDLSRN 101: FFVGKIPPEI GSLHETLKQL SLSENLLHGN IPQELGLLNR LVYLDLGSNR LNGSIPVQLF CNGSSSSLQY IDLSNNSLTG EIPLNYHCHL KELRFLLLWS 201: NKLTGTVPSS LSNSTNLKWM DLESNMLSGE LPSQVISKMP QLQFLYLSYN HFVSHNNNTN LEPFFASLAN SSDLQELELA GNSLGGEITS SVRHLSVNLV 301: QIHLDQNRIH GSIPPEISNL LNLTLLNLSS NLLSGPIPRE LCKLSKLERV YLSNNHLTGE IPMELGDIPR LGLLDVSRNN LSGSIPDSFG NLSQLRRLLL 401: YGNHLSGTVP QSLGKCINLE ILDLSHNNLT GTIPVEVVSN LRNLKLYLNL SSNHLSGPIP LELSKMDMVL SVDLSSNELS GKIPPQLGSC IALEHLNLSR 501: NGFSSTLPSS LGQLPYLKEL DVSFNRLTGA IPPSFQQSST LKHLNFSFNL LSGNVSDKGS FSKLTIESFL GDSLLCGSIK GMQACKKKHK YPSVLLPVLL 601: SLIATPVLCV FGYPLVQRSR FGKNLTVYAK EEVEDEEKQN QNDPKYPRIS YQQLIAATGG FNASSLIGSG RFGHVYKGVL RNNTKVAVKV LDPKTALEFS 701: GSFKRECQIL KRTRHRNLIR IITTCSKPGF NALVLPLMPN GSLERHLYPG EYSSKNLDLI QLVNICSDVA EGIAYLHHYS PVKVVHCDLK PSNILLDDEM 801: TALVTDFGIS RLVQGVEETV STDDSVSFGS TDGLLCGSVG YIAPEYGMGK RASTHGDVYS FGVLLLEIVS GRRPTDVLVN EGSSLHEFMK SHYPDSLEGI 901: IEQALSRWKP QGKPEKCEKL WREVILEMIE LGLVCTQYNP STRPDMLDVA HEMGRLKEYL FACPSLLHFS SQETQGEASS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)