AT2G18770.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.854 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Signal recognition particle receptor, beta subunit (InterPro:IPR019009); BEST Arabidopsis thaliana protein match is: signal recognition particle binding (TAIR:AT5G05670.1); Has 1043 Blast hits to 1043 proteins in 279 species: Archae - 2; Bacteria - 132; Metazoa - 396; Fungi - 167; Plants - 178; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:8134984..8136360 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28975.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.11 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||
| Length | 260 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDNLEDLKIV AEQWSKQGLE FVQKIPPPQL YTAIGVLLLA TIWLLSIRLF RRTKSNTVLL SGLSGSGKTV LFYQLRDGSS HQGAVTSMEP NEGTFVLHNE 101: NNTKKGKVKP VHLIDVPGHS RLISKLEEYL PRAAAVVFVV DALEFLPNIR AASEYLYDIL TNASVIKNKT PVLLCCNKTD KVTAHTKEFI RKQMEKEIDK 201: LRVSRSAIST ADIANDFTLG IEGEVFSFSH CHNKVTVAEA SGLTGETDQV QEFIREHVKP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)