AT2G12190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.501 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cytochrome P450 superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, leaf whorl, male gametophyte, flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 87, subfamily A, polypeptide 6 (TAIR:AT1G64940.1); Has 33026 Blast hits to 32861 proteins in 1697 species: Archae - 49; Bacteria - 3625; Metazoa - 11744; Fungi - 7006; Plants - 9305; Viruses - 3; Other Eukaryotes - 1294 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:4891807..4893345 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59307.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.14 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 512 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEIWLLILGS LFLSLLLNLL LFRRRDSSSL PLPPDPNFFP FLGTLQWLRQ GLGGLNNYLR SVHHRLGPII TLRITSRPAI FVADRSLAHQ ALVLNGAVFA 101: DRPPAAPISK IISSNQHNIS SSLYGATWRL LRRNLTSEIL HPSRVRSYSH ARRWVLEILF DRFGKSRGEE PIVVVDHLHY AMFALLVLMC FGDKLDEKQI 201: KQVEYVQRRQ LLGFSRFNIL NLWPKFTKLI LRKRWEEFFQ MRREQHDVLL PLIRARRKIV EERKNRSSEE EEDNKVYVQS YVDTLLELEL PDEKRKLNED 301: EIVSLCSEFL NGGTDTTATA LQWIMANLVK NPEIQKRLYE EIKSVVGEEA KEVEEEDAQK MPYLKAVVME GLRRHPPGHF VLPHSVTEDT VLGGYKVPKK 401: GTINFMVAEI GRDPMVWEEP MAFKPERFMG EEEAVDITGS RGIKMMPFGA GRRICPGIGL AMLHLEYYVA NMVREFEWKE VQGHEVDLTE KFEFTVVMKH 501: SLKALAVLRR SH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)