AT1G80710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DROUGHT SENSITIVE 1 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a WD40 repeat family protein containing a DWD (DDB1 binding WD40) motif. Mutant analysis demonstrates that DRS1 promotes tolerance to drought stress, possibly mediated by ABA, and suggests involvement of DDB1 Cul4–mediated protein degradation in drought response. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
DROUGHT SENSITIVE 1 (DRS1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: damaged DNA binding 2 (TAIR:AT5G58760.1); Has 13978 Blast hits to 9952 proteins in 465 species: Archae - 46; Bacteria - 2948; Metazoa - 4636; Fungi - 3015; Plants - 1520; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:30333499..30335796 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57780.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.74 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 516 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATEYERKRL ENIRRNDEML AALNVRAKAS SLLSAAKRSR DDSKSFKKKK PKPASTPTVI RMSLRTRGLN PDSAGLPDGF SDFRMGSQIT HNQPSPQKQS 101: PRLLAPIPFE SAYEGYGSYT QLVDTLLGIE SKSCRGKLVK GEIGVVKDEN ESPMVRTRSS SRVSKVSVKK EEPEDDSFSD YVNKEFSIPV KPEKIEFDLD 201: LLTLEPQNVA RVVPGRIFVV QFLPCENVKM VAAGDKLGNV GFWNLDCGNE EDNDGIYLFT PHSAPVSSIV FQQNSLSRVI SSSYDGLIRL MDVEKSVFDL 301: VYSTDEAIFS LSQRPNDEQS LYFGQDYGVF NVWDLRAGKS VFHWELHERR INSIDFNPQN PHVMATSSTD GTACLWDLRS MGAKKPKTLS TVNHSRAVHS 401: AYFSPSGLSL ATTSLDNYIG VLSGANFENT CMIYHNNTSR WISKFKAVWG WDDSYIYVGN LSKKIDVINP KLKRTVMELH NPLQRAIPCR IHCHPYNVGT 501: LAGSTAGGQV YVWTTK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)