AT1G79930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : heat shock protein 91 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes high molecular weight heat shock protein 70 not a HSP90 homolog, mRNA is constitutively expressed but transiently induced after heat shock | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
heat shock protein 91 (HSP91); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 26123 Blast hits to 25422 proteins in 4368 species: Archae - 147; Bacteria - 11514; Metazoa - 3855; Fungi - 1595; Plants - 1116; Viruses - 117; Other Eukaryotes - 7779 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:30063781..30067067 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 91755.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.89 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 831 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQIKRL IGRQFSDPEL QRDIKSLPFS VTEGPDGYPL 101: IHANYLGEKR AFTPTQVMGM MLSNLKGIAE KNLNTAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLRL IHETTATALA YGIYKTDLPE SDQLNVAFID 201: IGHASMQVCI AGFKKGQLKI LSHAFDRSLG GRDFDEVLFN HFAAKFKDEY KIDVSQNAKA SLRLRATCEK LKKVLSANPL APLNIECLMD EKDVRGVIKR 301: EEFEEISIPI LERVKRPLEK ALSDAGLTVE DVHMVEVIGS GSRVPAMIKI LTEFFGKEPR RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSIS 401: LAWKGAASEA QNGGAENQQS TIVFPKGNPI PSVKALTFYR SGTFSVDVQY SDVNDLQAPP KISTYTIGPF QSSKGERAKL KVKVRLNLHG IVSVESATLL 501: EEEEVEVPVT KEHSEETTKM DSDKASAEAA PASGDCDVNM QDAKDTSDAT GTDNGVPESA EKPVQMETDS KAEAPKKKVK KTNVPLSELV YGALKTVEVE 601: KAVEKEFEMA LQDRVMEETK DRKNAVESYV YDMRNKLSDK YQEYITDSER EAFLANLQEV EDWLYEDGED ETKGVYVAKL EELKKVGDPV EVRYKESLER 701: GSVIDQLGYC INSYREAAMS TDPKFDHIEL AEKQKVLNEC VEAEAWLRGK QQQQDTLPKY ATPALLSADV KSKAEALDKF CRPIMTKPKP VAKAEAPQAK 801: GGEQADEGKS EPEQPASAEP METENPAEGS T |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)