AT1G77530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.988 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-methyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 3283 Blast hits to 3279 proteins in 572 species: Archae - 3; Bacteria - 854; Metazoa - 104; Fungi - 647; Plants - 1564; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:29136037..29137423 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42328.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.15 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||||||||||
| Length | 381 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSNHLQDPLT TYPKPGLTKE EQEIDEKMVS LQAESIVNAV AFPMVLKAAL ELGVIDTIAA ASNGTWLSPS EIAVSLPNKP TNPEAPVLLD RMLRLLVSHS 101: ILKCCMVESR ENGQTGKIER VYAAEPICKY FLKDSDGSGS LSSLLLLLHS QVILKTWTNL KDVILEGKDA FSSAHDMRLF EYISSDDQFS KLFHRAMSES 201: STMVMKKVLE EYRGFEDVNT LVDVGGGIGT ILGLITSKYP HIKGVNFDLA QVLTQAPFYP GVKHVSGDMF IEVPKGDAIF MKWILHDWGD EDCIKILKNC 301: WKSLPEKGKV IIVEMITPME PKPNDFSCNT VLGMDLLMLT QCSGGKERSL SQFENLAFAS GFLLCEIICL SYSYSVIEFH K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)