AT1G76720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : eukaryotic translation initiation factor 2 (eIF-2) family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76820.1); Has 176116 Blast hits to 120626 proteins in 4229 species: Archae - 1560; Bacteria - 50188; Metazoa - 57384; Fungi - 15710; Plants - 7705; Viruses - 672; Other Eukaryotes - 42897 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28794144..28798780 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 131369.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1191 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MGRKKPSSSR GGDDEQPPAA SSLVGAESKK KAVQSDEEDK YSINTEEEKV VITGKKKSNK KVTQKHDDDD DFTEAVPENG FVGKKKKSKG KNRGGSVSFA 0101: LLSGKEETDD NESNGDKDDE PVISFTGKKN ASNKGKKGFA VSAFDALGGD KDDEEVDGDE EQVSPITFSE GTMGDEESLE ITFSGKKKGS IVLASLGDDS 0201: VADETSQAKT PDTKSVEVIE TGKIKKKKKN KNKVARTLEE EDDLDKLLAE LGETPAAERP ASSTPEVEKV QAQPGPVAPV ENAGEKEGEK ETVETAAAKK 0301: KKKKKEKDKE KKAAAAATSS VEAKEEKQEE SVTEPLQPKK KDAKGKAAEK KIPKHVREMQ EALARRQEAE ERKKKEEEEK LRKEEEERRR QEELEAQAEE 0401: AKRKRKEKEK EKLLRKKLEG KLLTAKQKTE AQKREAFKNQ LLAAGRGLPV ADDVGDATSS KRPIYANKKK PSRQKGNDTS VQVEDEVEPQ ENHAATLGEV 0501: GSEDTEKVDL LESANTGEKS GPADVAQENG VEEDDEWDAK SWDNVDLKID DKEEEAQPVV KKELKAHDSD HETEKPTAKP AGMSKLTTGA VKAISEVEDA 0601: ATQTKRAKKG KCLAPSEFIK EGGENLRSII CCIMGHVDSG KTKLLDCIRG TNVQEGEAGG ITQQIGATYF PAKNIRERTR ELKADAKLKV PGLLVIDTPG 0701: HESFTNLRSR GSSLCDLAIL VVDIKHGLEP QTIESLNLLR MRNTEFIIAL NKVDRLYGWK TCKNAPIVKA MKQQNKDVTN EFNIRLTDII TQFKEQGLNT 0801: EIYYKNKEMG ETFSIVPTSA KSGEGVPDLL LWLVQWAQKT MVEKLTYVDE VQCTVLEVKV IEGHGTTIDV VLVNGELHEG DQIVVCGLQG PIVTTIRALL 0901: TPHPMKELRV KGTYLHHKEI KAAQGIKITA QGLEHAIAGT SLHVVGPDDD IEAMKESAME DMESVLSRID KSGEGVYVQT STLGSLEALL EFLKTPAVNI 1001: PVSEGYNEGW SDAREEKEYA TILAFDVKVT TEARELADEM GVKIFCADII YQLFNQFQVY IENIKEEKKK ESAGEAVFPC VLQILPNCVF NKRDPIILGV 1101: KVHDGILKIG TPICVPGREF TDIGRIASIE NNHKPVDYAE KGDEVAIKIV ASNREEQKMF GRHFDMEDEL VSHISRRSID ILKADYMVSQ G |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)