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AT1G72690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.785
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17490.1); Has 59 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J3VCeggNOG:ENOG41114JHEMBL:AC010926EMBL:BT024634
EMBL:CP002684EnsemblPlants:AT1G72690EnsemblPlants:AT1G72690.1entrez:843601
GeneID:843601Gramene:AT1G72690.1hmmpanther:PTHR35277hmmpanther:PTHR35277:SF1
HOGENOM:HOG000005836KEGG:ath:AT1G72690OMA:EAMGHHEPhylomeDB:Q9CAI4
PIR:F96751Proteomes:UP000006548RefSeq:NP_177413.1TAIR:AT1G72690
UniGene:At.50029UniProt:Q9CAI4
Coordinates (TAIR10) chr1:+:27361223..27361745
Molecular Weight (calculated) 10025.60 Da
IEP (calculated) 6.69
GRAVY (calculated) -1.28
Length 87 amino acids
Sequence (TAIR10)
(BLAST)
1: MADQNRSEEK TVKSPNVFER VKEEIEAMGH HEKSKSRHHD KETHGTSDDI DESTPIDYVK GPGFFQRLKE EIEAIFNAVT PKRSSKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)