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AT1G67910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J8KGeggNOG:ENOG41118J3EMBL:AC012563EMBL:AK228852
EMBL:AK317135EMBL:BT014751EMBL:BT020248EMBL:CP002684
EnsemblPlants:AT1G67910EnsemblPlants:AT1G67910.1EnsemblPlants:AT1G67910.2entrez:843119
GeneID:843119Gramene:AT1G67910.1Gramene:AT1G67910.2hmmpanther:PTHR33132
hmmpanther:PTHR33132:SF8HOGENOM:HOG000029071KEGG:ath:AT1G67910OMA:FRCRIHR
PhylomeDB:Q9C9V7PIR:H96701Proteomes:UP000006548RefSeq:NP_001185348.1
RefSeq:NP_176958.1TAIR:AT1G67910UniGene:At.35587UniProt:Q9C9V7
Coordinates (TAIR10) chr1:-:25471534..25471809
Molecular Weight (calculated) 9940.91 Da
IEP (calculated) 10.49
GRAVY (calculated) -0.59
Length 91 amino acids
Sequence (TAIR10)
(BLAST)
1: MEKVQQMTNN KGIMKVEIHS HFNSAVEVGS RGLSRQTSMT KTNCLCSPTT HPGSFRCRIH RSLSLQRTKS IEAASLLDSP PKPADSPSTA T
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)