AT1G67690.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.825 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Zincin-like metalloproteases family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G51540.1); Has 5194 Blast hits to 5176 proteins in 1382 species: Archae - 6; Bacteria - 3154; Metazoa - 337; Fungi - 406; Plants - 147; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:25369086..25373730 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 80295.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.36 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 710 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTENEGNDKK IEGSNPKKKL NVVTFTGAAG LLGLAVSFAI FTFKSHKQKS KKKGLPGCDT VCVNLSAKEI LDLAEEIIHK STRVHDAVAL VSLDKLSYEN 101: VVLPLAELEA RQLSLIQCCV FPKMLSPHDN VRKASTEAEQ KIDAHILSCR KREDVYRIIK IYAAKGESIS PEAKCYLQCL VRDFEDNGLN LTAIKREEVE 201: RLKYEIDELS LRYIQNLNED SSCLFFTEDE LAGLPLEFLQ NLEKTQNKEF KLTLESRHVA AILELCKIAK TRKTVAMAYG KRCGDTNIPV LQRLVQSRHR 301: LACVCGYAHF ADYALDRRMS KTSMRVIRFL EDISSSLTDL AIREFSILED LKRKEEGEIP FGVEDLLYYI KRVEELQFDL DFGDIRQYFP VNLVLSGIFK 401: ICQDLFGIKF EEVTEVDVWY HDIRAFAVFD SGSGKLLGYF YLDMFTREGK CNHSCVVALQ NNALFSNGAC QIPVALLIAQ FAKDGSGEAV PLGFSDVVNL 501: FHEFGHVVQH ICNRASFARF SGLRVDPDFR EIPSQLLENW CYESFTLKLI SGYRQDITKP LVDEVCKTLK RWRYSFSALK SLQEILYCLF DQIIYSDDDA 601: DLLQLIRSLH PKVMIGLPVV EGTNPASCFP RAVIGSEATC YSRLWSEVYA ADIFASKFGD GHPNLYAGLQ FRDKVLAPGG GKEPMELLTN FLGREPSTQA 701: FIASRTNYSL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)