AT1G65890.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : acyl activating enzyme 12 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
acyl activating enzyme 12 (AAE12); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: leaf apex, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: benzoyloxyglucosinolate 1 (TAIR:AT1G65880.1); Has 77298 Blast hits to 71199 proteins in 3613 species: Archae - 1120; Bacteria - 50555; Metazoa - 3258; Fungi - 3581; Plants - 2188; Viruses - 1; Other Eukaryotes - 16595 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24512598..24514611 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64728.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.11 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 578 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDNLALCEAN NVPLTPITFL KRASECYPNR TSIIYGKTRF TWPQTYDRCC RLAASLISLN IGKNDVVSVV APNTPAMYEM HFAVPMAGAV LNPINTRLDA 101: TSIAAILRHA KPKILFIYRS FEPLAREILQ LLSSEDSNLN LPVIFIHEID FPKRVSSEES DYECLIQRGE PTPLLLARMF CIQDEHDPIS LNYTSGTTAD 201: PKGVVISHRG AYLSTLSAII GWEMGTCPVY LWTLPMFHCN GWTFTWGTAA RGGTSVCMRH VTAPEIYKNI EMHNVTHMCC VPTVFNILLK GNSLDLSHRS 301: GPVHVLTGGS PPPAALVKKV QRLGFQVMHA YGLTEATGPV LFCEWQDEWN RLPENQQMEL KARQGLSILG LTEVDVRNKE TQESVPRDGK TMGEIVMKGS 401: SIMKGYLKNP KATYEAFKHG WLNSGDVGVI HPDGHVEIKD RSKDIIISGG ENISSVEVEN IIYKYPKVLE TAVVAMPHPT WGETPCAFVV LEKGETNNED 501: REDKLVTKER DLIEYCRENL PHFMCPRKVV FLDELPKNGN GKILKPKLRD IAKGLVAEDE VNVRSKVQRP VEHFTSRL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)