AT1G65280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DNAJ heat shock N-terminal domain-containing protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Protein of unknown function DUF3752 (InterPro:IPR022226); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G22080.2); Has 26180 Blast hits to 20391 proteins in 2424 species: Archae - 138; Bacteria - 5225; Metazoa - 9539; Fungi - 2558; Plants - 2202; Viruses - 36; Other Eukaryotes - 6482 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24245501..24248521 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66503.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.25 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.12 | ||||||||||||||||||||||||||||||||||||
| Length | 588 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKHWKRDSD SGDDTPSSAT SSSSSYSSDE SDSSSRKWRK KQKERRKSDG GSYEREKRRK REKERKRKKI ERKERKRRDM KKKKKTKKRE YESDTESYSG 101: SDSFSDQEDD PETVVKEMLL EFPNVGNDLK QLLKMIDDGQ AVDIKGISES TLKKRLKKLF LSLKLKERGD RVFLLPPGAS PSLDVVGHLI KGGEEDVEKS 201: LDDSSPLKET EKGLADENGL GSNSADDVTG PKKRVIGPAM PSAELLAAAA KLTEAQAELR EAELEEDSEY FIGPAPPAVV AEVASSNEAE RFEEVTRIME 301: ADANSPYDVL GVNHNMAADN MKKRYWKLSL LVHPDKCSHP QAQEAFVLLN KAFKELQDPE KRKAMDDKIK LKEEQEAFKV ELRSMQEAAQ WRRSQGISME 401: GDAELLAATE VKPEPKRDEW MTTLPPERKV GVAVQQSTTF SRNAREGRGD TTAWTDTPMD KAERAKMNYL EAYNKASALA SNEGENMKRS MDAELVDKYN 501: KEKRAKSLVE KHREDSSSSS SRLKKKKKLS SSKEKTEKDE WVGKHPWKPW DRENDLTAGR QNVKLDADGM AEGLASKFSS GNFQRSFL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)