AT1G64170.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.597 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cation/H+ exchanger 16 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Putative Na+/H+ antiporter family | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cation/H+ exchanger 16 (CHX16); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: stem, male gametophyte, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 10345 Blast hits to 10314 proteins in 2156 species: Archae - 371; Bacteria - 8080; Metazoa - 56; Fungi - 195; Plants - 675; Viruses - 0; Other Eukaryotes - 968 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:23815239..23818293 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 88055.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.64 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.40 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 811 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGTLVNGTIP AMKCPKNVAM MKTTSNGVFD GESPLDFAFP LVILQICLVV AVTRSLAFLL RPMRQPRVVA EIIGGILLGP SALGRITSYK NSIFPARSLT 101: VLDTLANLGL LLFLFLVGLE IDLTSLRRTG KKAISIAAAG MLLPFGMGIV TSFAFPEASS SGDNSKVLPF IIFMGVALSI TAFGVLARIL AELKLLTTDL 201: GRISMNAAAI NDVAAWVLLA LAVSLSGDRN SPLVPLWVLL SGIAFVIACF LIVPRIFKFI SRRCPEGEPI GEMYVCVALC AVLLAGFATD AIGIHAIFGA 301: FVMGVLFPKG HFSDAIVEKI EDLVMGLLLP LYFVMSGLKT DITTIQGVKS WGRLALVIVT ACFGKIVGTV SVALLCKVRL RESVVLGVLM NTKGLVELIV 401: LNIGKDRKVL SDQTFAIMVL MAIFTTFITT PIVLALYKPS ETTQTHSSVS YKNRKHRRKI ENDEEGEKMQ QLKVLVCLQS SKDIDPMMKI MEATRGSNET 501: KERFCVYVMH LTQLSERPSS IRMVQKVRSN GLPFWNKKRE NSSAVTVAFE ASSKLSSVSV RSVTAISPLS TIHEDICSSA DSKCTAFVIL PFHKQWRSLE 601: KEFETVRSEY QGINKRVLEN SPCSVGILVD RGLGDNNSPV ASSNFSLSVN VLFFGGCDDR EALVYGLRMA EHPGVNLTVV VISGPESARF DRLEAQETSL 701: CSLDEQFLAA IKKRANAARF EERTVNSTEE VVEIIRQFYE CDILLVGKSS KGPMVSRLPV MKIECPELGP VGNLIVSNEI STSVSVLVVQ QYTGKGPSVV 801: GSVSVPVVET P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)