AT1G61670.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.961 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Lung seven transmembrane receptor family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G10980.1); Has 653 Blast hits to 651 proteins in 175 species: Archae - 0; Bacteria - 2; Metazoa - 278; Fungi - 148; Plants - 158; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:22770132..22772258 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57693.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.82 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.17 | ||||||||||||||||||||||||||||
| Length | 513 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKNRSLGFWA IGVLLIGSLI GATEGSIHEY NNEKFTAKFN ARFFHGGSEG LYASKSQDLN SSSSSDNSFK GKSFIRFDDV TFVRTKESAS KQNAMQSTSG 101: LVEAIILEVK DRDRIGGTFL KSEVICCTPE LADTGSCSLG EVIIKRESND VEWPRQIKTF FKGNKTEVNM SPETVVINKT GMYYLYFMIC DPELDGTRIK 201: GRTVWKNPDG YLPGKVAPLM NVFGFMSLAY ILLGLVWFVR FVQFWKDIIQ LHYHITLVIA LGMCEMAVRY FEYVNFNSTG MRPMDVTLWA VTFSSIKKTL 301: SRLLLLVVSM GYGVVKPTLG GITSRILLLG VIYFVATEAL ELVEHLGNIN DFSGKTMIVL VIPVALLDAC FILWIFSSLA RTLEKLQIKR NMAKLELYRN 401: FTNALAISVL LSIAWIGFEL YFNGTDPLIE LWRMAWIIPA FWNLLSYGLL AVICILWAPS NNPTRYSYLA ETGDEFEEEG ISLTGSGIKS TEDVERNELL 501: FGLPDDVEEG KRE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)