AT1G61640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G11390.1); Has 9331 Blast hits to 9278 proteins in 1808 species: Archae - 122; Bacteria - 4378; Metazoa - 406; Fungi - 512; Plants - 679; Viruses - 16; Other Eukaryotes - 3218 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22746629..22749053 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 70472.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.37 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||
| Length | 621 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTLISRFLIS RVISRTLFSN QNNRTAINVS VKLPQFRIQS NGYHTLGLLH NVKGRFLGSN HHQLARRSYS IAVASNVVKQ HAQVSWGRLV QRVTLSRSWN 101: LPRISQIAQA CSLSLARSHF LLPGLLALTY RQVAYAQRVV PNPVVYSPSH ISPYRSSINF PIVLSSLVFS AVKGVVLIGR ALYLAILFSP NVIMALLGFA 201: CGPRYRQLQY EVLHRTLEKA GPAFIKFGQW IATRPDRFNK DLCLQLSKLH SNAPEHSFAF TKKSIENAFG RKLSEIFEEF DEAPVASGSI AQVHRASLKF 301: QYAGQKVKSS EVAVKVRHPC VEETMKRDFV IINFVARLTT FIPGLNWLRL DECVQQFSVY MLSQVDLSRE ASHLSRFIYN FRGWKDVSFP KPIYPLIHPA 401: VLVETYEHGE SVARYVDGSE GQEKLKAKVA HIGTNALLKM LLVDNFIHAD MHPGNILVRP NNTRRGLFRS RKPHIVFLDV GMTAELSKTD RDNLLGFFKA 501: VARRDGRTAA ERTLKLSKQQ NCPDPQAFIK EVEEAFTFWG TEEGDLVHPA DCMHELFEKM RSHRVNIDGN VSTVMFTTLV LEGWQRKLDP GYDVMRTLQT 601: MLLKTDWMKS LSYTIDGLMA P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)