AT1G61190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : LRR and NB-ARC domains-containing disease resistance protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:22557602..22560687 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 111538.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.65 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 967 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGNFVCIEIS GDQMLDRIIR CLCGKGYIRN LEKNLRALQR EMEDLRATQH EVQNKVAREE SRHQQRLEAV QVWLDRVNSI DIECKDLLSV SPVELQKLCL 101: CGLCSKYVCS SYKYGKRVFL LLEEVTKLKS EGNFDEVSQP PPRSEVEERP TQPTIGQEEM LKKAWNRLME DGVGIMGLHG MGGVGKTTLF KKIHNKFAET 201: GGTFDIVIWI VVSQGAKLSK LQEDIAEKLH LCDDLWKNKN ESDKATDIHR VLKGKRFVLM LDDIWEKVDL EAIGIPYPSE VNKCKVAFTT RDQKVCGQMG 301: DHKPMQVKCL EPEDAWELFK NKVGDNTLRS DPVIVGLARE VAQKCRGLPL ALSCIGETMA SKTMVQEWEH AIDVLTRSAA EFSDMQNKIL PILKYSYDSL 401: EDEHIKSCFL YCALFPEDDK IDTKTLINKW ICEGFIGEDQ VIKRARNKGY EMLGTLIRAN LLTNDRGFVK WHVVMHDVVR EMALWIASDF GKQKENYVVR 501: ARVGLHEIPK VKDWGAVRRM SLMMNEIEEI TCESKCSELT TLFLQSNQLK NLSGEFIRYM QKLVVLDLSH NPDFNELPEQ ISGLVSLQYL DLSWTRIEQL 601: PVGLKELKKL IFLNLCFTER LCSISGISRL LSLRWLSLRE SNVHGDASVL KELQQLENLQ DLRITESAEL ISLDQRLAKL ISVLRIEGFL QKPFDLSFLA 701: SMENLYGLLV ENSYFSEINI KCRESETESS YLHINPKIPC FTNLTGLIIM KCHSMKDLTW ILFAPNLVNL DIRDSREVGE IINKEKAINL TSIITPFQKL 801: ERLFLYGLPK LESIYWSPLP FPLLSNIVVK YCPKLRKLPL NATSVPLVEE FEIRMDPPEQ ENELEWEDED TKNRFLPSIK PLVRRLKIHY SGMGFLNVKN 901: QNPRFFFYCF IYLLVVHLDC IIDLHSDTSG MCCVVHLDYV FHFPFVFPKT FCILFRLHFY TIKSLCV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)