AT1G50520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 27 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP705A | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 705, subfamily A, polypeptide 27 (CYP705A27); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 25 (TAIR:AT1G50560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:18719381..18721070 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60570.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.60 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 533 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAITVDFQL CFIFILLGIF SLFCLSAFFF KKPKDPQLQG CGLPPSPPSL PVIGHLHLLL SVPCLKSFQK LSSKYGPLLH LRAFNIPIVI VSSGSMANEV 101: LRTQDLNFAT RQREVSIMEK SLLFGSFGFV SAPYGDYWRF MKKLLVTNLF GSHSLEQTRL IREKELKTFR TMLFDKAAKK GTVDVGKEMM KLTNNSICRM 201: IMGRRCSEEN SEAEKVEDLV IKSFSLVKKV LIANTVGRLL KKFGISLFEK EIMEVSQRYD ELLEKIIKEH EEDPNKKEDR DMMDVLLEVC ADDKAEVKIT 301: RNQIKALIVE LFLGGTDTSA QTIQWIMAEL INHPEILKIL REEIESVVGT TRFIQETDLS NLPYLQAVMK EGQRLHPHSP MLVRNATKGC KIGGYYIPQN 401: TTMLINTYAM MIDPDSWENP DKFQPERFMV SPSKGKDDER EQLALNFIPF GSGRRACPGE KLGYLFTGVA IGTMVQCFDW IIDGDKVNVE EAGEMTLTMA 501: HPLKCTPVTR VNPLASFESE DPKWLMEEFD MYC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)