AT1G48490.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 21758 Blast hits to 20335 proteins in 1211 species: Archae - 24; Bacteria - 4178; Metazoa - 5436; Fungi - 2024; Plants - 6604; Viruses - 27; Other Eukaryotes - 3465 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:17922345..17928597 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 137356.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.51 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.53 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1235 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MVFKSKLFFS SKKSRSSSPS SSNSPRSVGS DSPIRSDKKK PKSNSKEETR SPNTKKHVSA KGKEASLEVH SSSPGKSNSS SSGSEAKKPI TETPATSDVK 0101: EESPASVSPI MASSLGLNRI KTRSGPLPQE SFFSFENDYA IPVLPCYKLS KLDTGKKEAG SSKVDIGPLR SSNPALLASG TGQFKVSPTI SGPEGSAEVC 0201: TPENSYDLDD PKESDSPRYQ ALLRMTSAPR KRFPGDIKSF SHELNSKGVR PFPLWKPRRL NNLEDILNLI RTKFDKAKEE VNSDLFAFGG DLLDIYDKNK 0301: ESHPELLVTI EDLLVLAKTC AKTTSKEFWL QCEGIVQDLD DRRQELPPGV LKQLHTRMLF ILTRCTRLLQ FHKESWGQEE DAVQLRQSGV LHSADKRDPT 0401: GEVRDGKGSS TANALKVPST KKAYSQEQRG LNWIEGFFVR PAPLSSPYNE TSKDSESPAN IDKMSSWKRL PSPASKGVQE AAVSKEQNDR KVEPPQVVKK 0501: LVAISDDMAV AKLPEVSSAK ASQEHMSKNR HNISWGYWGH QSCISEESSI ICRICEEEIP TTHVEDHSRI CALADKYDQK GVGVDERLMA VAVTLEKITD 0601: NVIQKDSLAA VESPEGMKIS NASLTEELDV LSPKLSDWSR RGSEDMLDCF PETDNSVFMD DMGCLPSMSC RTRFGPKSDQ GMATSSAGSM TPRSPIPTPR 0701: PDPIELLLEG KGTFHDQDDF PQMSELADIA RCAANAIPVD DQSIQLLLSC LEDLRVVIDR RKFDALIVET FGTRIEKLIQ EKYLQLCELM DDEKGTIIDE 0801: DAPLEDDVVR SLRTSPVHLR DRISIDDFEV MKSISRGAFG HVILARKNTT GDLFAIKVLR KADMIRKNAV ESILAERDIL INARNPFVVR FFYSFTCSEN 0901: LYLVMEYLNG GDFYSMLRKI GCLDEANARV YIAEVVLALE YLHSEGVVHR DLKPDNLLIA HDGHVKLTDF GLSKVGLINN TDDLSGPVSS ATSLLVEEKP 1001: KLPTLDHKRS AVGTPDYLAP EILLGTGHGA TADWWSVGII LYEFLVGIPP FNADHPQQIF DNILNRNIQW PPVPEDMSHE ARDLIDRLLT EDPHQRLGAR 1101: GAAEVKQHSF FKDIDWNTLA QQKAAFVPDS ENAFDTSYFQ SRYSWNYSGE RCFPTNENED SSEGDSLCGS SGRLSNHHDE GVDIPCGPAE FETSVSENYP 1201: FDNFSFKNLS QLAYINYNLM SKGHKDETQP SLQRR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)