AT1G48430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.895 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Dihydroxyacetone kinase | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Dihydroxyacetone kinase; FUNCTIONS IN: glycerone kinase activity, ATP binding; INVOLVED IN: glycerol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dak phosphatase (InterPro:IPR004007), Dihydroxyacetone kinase (InterPro:IPR012734), Dak kinase (InterPro:IPR004006); BEST Arabidopsis thaliana protein match is: Dihydroxyacetone kinase (TAIR:AT3G17770.1); Has 5033 Blast hits to 5026 proteins in 1105 species: Archae - 14; Bacteria - 4080; Metazoa - 97; Fungi - 207; Plants - 69; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:17902874..17906689 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61928.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.94 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 593 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVPPAKKFIN NPNDVVTEFI EGLVETYPGL QYLDGLPEIK VVLRADVSAA NYDKVAVISG GGSGHEPAQA GYVGEGMLTA AICGDVFASP TVDSILARIR 101: AVTGPKGCLL VVTNYTGDRL NFGLAAEQAK TEGFDIETVI VGDDCALPPP RGVAGRRGLA GTVLVHKVAG AAAAAGLSLA EVAAEAKHAS EMVGTMGVAL 201: SVCALPGQVT SDRLGPEKME LGLGVHGEPG AAVVDIQPVE VVVSHVLQQI LSPETNYVPI TRGNSVVLMI NGLGGTPLME LMIAAGKAVP KLQLEYGLAV 301: DRVYTGSFMT SLDMAGFSIS IMKADQSILE RLDAPTNAPS WPVGTDGSRP PAKIPVPLPF RSTKNEESRY RPQELSQQGR ILEAAIEAAA TVVINLKDSL 401: NEWDGKVGDG DCGSTMCRGA TAILEDMKKY YPLNDAAETV SEIGSSIRRV MGGTSGIIYN LLCKAAYAEL KANSQSETTS KHWSEALKSS ISAVSKYGGA 501: TAGYRTMLDA LIPASKVLEE KLSVGEDPIA AFVLSAEAAT AGAESTIHMK AQAGRSSYVS AEIFASIPDP GAMAAAAWYS AAARAVKEQR QRF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)