AT1G30540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Actin-like ATPase superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Actin-like ATPase superfamily protein; CONTAINS InterPro DOMAIN/s: ATPase, BadF/BadG/BcrA/BcrD type (InterPro:IPR002731); Has 1833 Blast hits to 1833 proteins in 714 species: Archae - 64; Bacteria - 1392; Metazoa - 117; Fungi - 35; Plants - 122; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:10816951..10819172 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36614.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.83 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.08 | ||||||||||||||||||||||||||||
| Length | 351 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRNPHSNGNL RKLEADGGGE ATEENGFVNG VILGLDGGAT STVCVCVPFF SFGERFPDPL PILGRAVAGC TNRNSVGETA ARDSLEQVIS EALVQSGFDK 101: SDVRGVCLGV SGVNHPSDQE KIENWIRDMF PSHVKVYVQN DAIVALASGT MGKLHGCVLI AGTGCIAYGF DEDGKEARAS GGGPILGDWG SGYGIAAQAL 201: TAVIRAHDGR GPQTMLTSTI LKALGLSSPD ELIGWTYADP SWARIAALVP QVVSCAEAGD EISDKILVDA AEDLALSVKA VVQRLGLCGK DGTASFPVVM 301: VGGVLNANQK WDIGKEVSKR INRYFPGAQT IIPKVEPAVG AALLAMNFLS S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)