AT1G29030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.508 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Apoptosis inhibitory protein 5 (API5) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Apoptosis inhibitory protein 5 (API5); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Apoptosis inhibitory protein 5 (API5) (TAIR:AT2G34040.1); Has 834 Blast hits to 647 proteins in 164 species: Archae - 2; Bacteria - 50; Metazoa - 244; Fungi - 88; Plants - 132; Viruses - 7; Other Eukaryotes - 311 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:10129201..10133697 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62283.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.18 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||||||||||
| Length | 556 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSEQYSEDAK HIEKLYEFDE RLSESTDKSQ NVQDYEGIIE LSKTNIKTKQ LGAQLIPRYF KFFTSLATEA FDAYLDIFDE VEVGVRVQAI RGLPLFCKDT 101: PDFISKIIDV LVQCLNTEEF VERDAVHKAL MSLFRQDTKA SLTALFKHTE ATLSTDEQIR EKVLHFIRDK VFPLKGELLK PQQEMERHIT DLIKKSLGDV 201: TGEEFNMFMD FLKSLSIFGG KAPQERMQEL VEIIEGQADL DSEFNVSDTD HIDRFISCLQ TALPFFARGA PGSKFLNYLN KNIMPAFDQL PEERKLNLLR 301: ALAEMSPYTT AQVARQILPS IVQLLKKYMP ARKTGEEMNF TYVECLLYVL HHLAHKAPNA TNSLCGYKIV TGQPSDRLGE DFSEFNKEFT ERLTSVEDLT 401: KATMKKLTQG MSEHSKAMST AKTDEEKSIV KTKKQSTTTG LRTCNNILAM TKGLHAKAPS FIGNTSVTLS WKEPTKVTKP LASTTTGGKR PANGAGNNVG 501: AKKARVQNQQ QVVNKRSEGI SHGGGRGSHR GRGRGQGQGR HSGGGGGRGR GRRGFW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)