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AT1G28395.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2MGeggNOG:ENOG410ZH16EMBL:AK228142EMBL:AY085292
EMBL:BT025573EMBL:CP002684EnsemblPlants:AT1G28395EnsemblPlants:AT1G28395.1
EnsemblPlants:AT1G28395.2EnsemblPlants:AT1G28395.3entrez:839737ExpressionAtlas:Q8LEQ7
GeneID:839737GO:GO:0005739Gramene:AT1G28395.1Gramene:AT1G28395.2
Gramene:AT1G28395.3hmmpanther:PTHR33156hmmpanther:PTHR33156:SF10HOGENOM:HOG000237694
PhylomeDB:Q8LEQ7Proteomes:UP000006548RefSeq:NP_564308.1RefSeq:NP_849722.1
RefSeq:NP_973928.1STRING:3702.AT1G28395.1TAIR:AT1G28395UniGene:At.40897
UniProt:Q8LEQ7
Coordinates (TAIR10) chr1:-:9970134..9971433
Molecular Weight (calculated) 10370.50 Da
IEP (calculated) 11.89
GRAVY (calculated) -0.15
Length 95 amino acids
Sequence (TAIR10)
(BLAST)
1: MSAARSVFRS AASRASSTAF RFSAGPKPMP SSARTAFRMP KQSPLTNRIF RSPVELSCCV ETMLPYHTAT ASALLNSMLS VSRRGWIVDG LDETR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)