AT1G20060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP binding microtubule motor family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G60930.1); Has 10625 Blast hits to 10139 proteins in 419 species: Archae - 2; Bacteria - 255; Metazoa - 4769; Fungi - 1373; Plants - 1690; Viruses - 3; Other Eukaryotes - 2533 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:6950723..6956293 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 108160.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.32 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.72 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 970 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEKQKSLSP PPCPSTVTVR RNPPRRARAT PFTTTTKPPL SSLACAKPHD VPTFPIDEIL SIQIPQSEPK PAIAESLKIF LRIKPLRTFT KVTTTTKSRP 101: RNVWPQNPSK KNNAKENRNP EITKKVRKKD EEACITLNDS YSVTLTPPQS LQELKRSKTE VYEGFSHVFP ADCSQNDVYD KMVQPLLEDF MKGKSGMLAA 201: LGPSGSGKTH TVFGSLKDPG IVPITLRQIF KKNDESCSGS LRSFNLSIFE ICSERGKGEK AYDLLGGESS ELSVQQSTIR GLKEVPIQNL EEAESLIGQA 301: MLKRATATTN SNSQSSRSQC IINIRASCNG FSNETKLQSS DAMLTIVDLA GAEREKRTGN QAIDFGLPGT DPYFILFLMP TIPLTMNTRY LLAVTVGVPE 401: EPKEGIAETS SKFFGSLTRY LRDYLEGKKR MALILTVKAG EEDYLDTSYL LRQASPYMKI KFDNTEEPCN KRQLKTFPRA EKNKKIKLSA PKTSQIEENF 501: QGERCQISQE VNLQGKKADP TDRSSPRLEH VAQDKNEREH IIMRNFSKVL WNVLKQCNEK LKVAEGEIFT LKDSLRREQL KSLGLETELI SLKSSCLAQP 601: CIPEVEVIVN AKEHFEVDAA LTNERNVDDD SCNLIKARRE AGAEESSETP VPKVRNVDDD SCNLIKARRE AGAEESSESP VLSVLRNVDD DSCNLIEARR 701: EAGSEESSKS PVPNVRNVDV DSCNLINPRR EASTEESSES PVLSKNVKDA ELVPCHLSSE NDAEPRQSVN SEENVGIPST ITHVEAEVTD FQRDQNQDDP 801: TPSPEQVEVS QDCINSGLSN VQTKSAISRR FPDSEKQERN RRLLPASSRS LTEEMNDLEI KDIQTEKQQV KTTNTRVQKK AVSIQGQETE VPPREAEPAS 901: TKKQKNGQKP KRRLQPASSV LLTREINTLE IEDDIAEPKV NRGGKKTTVS QPRSQGSVTL LRLLTNNLHL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)