AT1G17350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NADH:ubiquinone oxidoreductase intermediate-associated protein 30 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NADH:ubiquinone oxidoreductase intermediate-associated protein 30; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (TAIR:AT1G72420.1); Has 552 Blast hits to 552 proteins in 198 species: Archae - 0; Bacteria - 134; Metazoa - 110; Fungi - 92; Plants - 100; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5942391..5944272 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25249.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.28 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||||||
| Length | 227 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSRFRSLLQA SVNATKKALT WNVEEWVPPA EKHIFKFHSK EDLKKWHLYS DSEYGGLSSA SLEIPDKGDG SDCTGVFSGN LSVDLSEGSK WNISRSGFCG 101: MRSKKFDGFI DLDGYDAIAL RIRGDGRCYI STIYTENWVN SPGQSEDNSW QAFVFAPKDS WYTAKIPLAR YLPTWRGNVI DVEMEMNPGR VLGMSLSVNA 201: EGGAVGAKSG AGDFRVEIDW IKALRLP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)