AT1G17330.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.563 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Metal-dependent phosphohydrolase | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); Has 1677 Blast hits to 1677 proteins in 841 species: Archae - 70; Bacteria - 1404; Metazoa - 0; Fungi - 90; Plants - 42; Viruses - 5; Other Eukaryotes - 66 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:5929966..5931595 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25504.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.47 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.63 | ||||||||||||||||||||||||||||||||
| Length | 222 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAKTMRKAE ELVEKAMKGN DASHDAWHVW RVRDLALSIA REEGLSSNSD SMEIVELAAL LHDIGDYKYI RDPSEEKLVE NFLDDEGIEE TKKTKILTII 101: NGMGFKDELA GVALCESLPE FGVVQDADRL DAIGAIGIAR CFTFGGSRNR VLHDPEIKPR TELTKEQYIK REEQTTINHF HEKLLKLKKL MKTEAGKRRA 201: EKRHKFMEEY LKEFYEEWDG ST |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)