AT1G16630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.890 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16270.1); Has 10587 Blast hits to 5736 proteins in 617 species: Archae - 88; Bacteria - 963; Metazoa - 3686; Fungi - 820; Plants - 541; Viruses - 438; Other Eukaryotes - 4051 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:5682212..5684749 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 93879.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.13 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||||||
| Length | 845 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASSPAKNKI SVSPSSLFSS SSPSMPSRPN PKQRNSETGD LMRRSFRGNP FSADPSRRNS IGRECSNRVE IGDKENQNDK DQIANVVKGP TKGSKHFMSP 101: TISAVSKINP SPRKKILSDK NEVSRSFDKS HHQVQVKSSV SFSDVISIIG EDKDVDQICI DETKQLREEE SHDITVSDFD EILERKSNDN SSFKISPLPP 201: YVPCTFPVFE SHEVDPVVAP YDPKKNYLSP RPQFLHYKPN PKIEHRSDEC KQLEELFISE SSSSDTDLSA EREEEGQQEE EVASQEGVVA VEEQEDDGEE 301: RLEAAEEILD VDGEERLEAV ESDDEEEEVV VGESIEEEET HQISKQSRFS KTSMLLGWIL ALGVAYLLLV SSTTFSQQTI TDSPFYQFNI SPEIIMSASE 401: NFEQLGAKLR MWAESSFVYL DKLVSSLREE EGSVPFQFHN LTVLLEDKRL SDAVFQSTSV EIIVDGFIVD SLEVDIEEVN VGHQEPEEES ENSGEISLEA 501: VYEEDDNEVE QENEEGKVNL EIVDECDEQA EIKIATDTEV NGGERYSESL SEEGHGGQET DVVEGQEEYE ENDQNNMEEA ESDAQLLDDV QSAAISSNQQ 601: EQTGVANVET VQEEEGVGEI AGGSLSVSEE ATDVEHDGNE VEEEESGFGE VVNDAGSEDI LLSGQKKVLV LFSTMMVILA AVAAGFLLAK KKTKPVMLQH 701: EDGEPTAISA TKVVEHVPVE NLIRERLSSL NFKEEEEEVG DDRKREVSSF PSEMSFSFSK NKPLHSCSNK KDDLKEHQSG GGGKKSNDSG ESMASSASEY 801: SIGSVSYGSF TTYEKIQKRS GHEEKEMITP VRRSSRIRNH QHSGQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)