AT1G14190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.409 plasma membrane 0.377 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glucose-methanol-choline (GMC) oxidoreductase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G14185.1); Has 12034 Blast hits to 11141 proteins in 1120 species: Archae - 6; Bacteria - 4075; Metazoa - 1036; Fungi - 1877; Plants - 336; Viruses - 6; Other Eukaryotes - 4698 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:4852802..4854307 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55141.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.52 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||
| Length | 501 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPYMTTDAKE VSGKSFDYIV VGGGTAGCSL AATLSEKYSV LVIERGGSPF GDPLVEERKY FGYSLLNTDE YSSVAQSFTS VDGIENYRGR VLGGSSAING 101: GFYSRASDEF VKKAGWDKGL VQESYKWVES KVVFMPELTQ WQSVVQFGFL EAGFYPYNGY SLEHTQGTKI GGSIYDQCGK RHTSADLLGF GKPNCITVLL 201: NTTVKSIIFD SSNKTRAVGV RFMESDGNSS KSYKVHVEQH RGEVILAAGA LGSPQILLLS GIGPENHLKD FDIPVIVNLK EVGRKMSDNP AISLLVDRFS 301: QNRTLEPPQV AAIAEGYKFI LESEVLPTDI TTTRISIAAK IAFPKSKGRL KLNSTNPREN PSVKFNYLEN KADLDACLEM VLHLQHVARS ETVTFFLGTQ 401: AHDKLVAGDE ELKSFCIKNV RTYYHYHGGC VVGSVVDEEY KVNGVKRLRV VDGSTFEESP GTNPMATVLM LGRYQGIKIL KEREEQEDTF LSPQGSPQPQ 501: P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)