AT1G11300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11330.2); Has 247442 Blast hits to 123826 proteins in 4585 species: Archae - 216; Bacteria - 26920; Metazoa - 91063; Fungi - 20518; Plants - 70734; Viruses - 831; Other Eukaryotes - 37160 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:3794389..3800719 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 184371.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.15 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1650 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MRLHESSSPF VCILVLSCFF LSVSLAQERA FFSGKLNDSE TIVSSFRTFR FGFFSPVNST SRYAGIWYNS VSVQTVIWVA NKDKPINDSS GVISVSQDGN 0101: LVVTDGQRRV LWSTNVSTQA SANSTVAELL DSGNLVLKEA SSDAYLWESF KYPTDSWLPN MLVGTNARIG GGNVTITSWK SPSDPSPGSY TAALVLAAYP 0201: ELFIMNNNNN NSTVWRSGPW NGQMFNGLPD VYAGVFLYRF IVNDDTNGSV TMSYANDSTL RYFYMDYRGS VIRRDWSETR RNWTVGLQVP ATECDNYRRC 0301: GEFATCNPRK NPLCSCIRGF RPRNLIEWNN GNWSGGCTRR VPLQCERQNN NGSADGFLRL RRMKLPDFAR RSEASEPECL RTCLQTCSCI AAAHGLGYGC 0401: MIWNGSLVDS QELSASGLDL YIRLAHSEIK TKDKRPILIG TILAGGIFVV AACVLLARRI VMKKRAKKKG RDAEQIFERV EALAGGNKGK LKELPLFEFQ 0501: VLAAATNNFS LRNKLGQGGF GPVYKGKLQE GQEIAVKRLS RASGQGLEEL VNEVVVISKL QHRNLVKLLG CCIAGEERML VYEFMPKKSL DYYLFDSRRA 0601: KLLDWKTRFN IINGICRGLL YLHRDSRLRI IHRDLKASNI LLDENLIPKI SDFGLARIFP GNEDEANTRR VVGTYGYMAP EYAMGGLFSE KSDVFSLGVI 0701: LLEIISGRRN SNSTLLAYVW SIWNEGEINS LVDPEIFDLL FEKEIHKCIH IGLLCVQEAA NDRPSVSTVC SMLSSEIADI PEPKQPAFIS RNNVPEAESS 0801: ENSDLKDSIN NVTITDVTGL FRLERLGLKD MRLHESLSPI VHVLSLSCFF LSVSLAHERA LFSGTLNDSE TIVSSFRTFR FGFFSPVNST NRYAGIWYNS 0901: IPVQTVIWVA NKDTPINDSS GVISISEDGN LVVTDGQRRV LWSTNVSTRA SANSTVAELL ESGNLVLKDA NTDAYLWESF KYPTDSWLPN MLVGTNARTG 1001: GGNITITSWT NPSDPSPGSY TAALVLAPYP ELFIFNNNDN NATVWRSGPW NGLMFNGLPD VYPGLFLYRF KVNDDTNGSA TMSYANDSTL RHLYLDYRGF 1101: AIRRDWSEAR RNWTLGSQVP ATECDIYSRC GQYTTCNPRK NPHCSCIKGF RPRNLIEWNN GNWSGGCIRK LPLQCERQNN KGSADRFLKL QRMKMPDFAR 1201: RSEASEPECF MTCLQSCSCI AFAHGLGYGC MIWNRSLVDS QVLSASGMDL SIRLAHSEFK TQDRRPILIG TSLAGGIFVV ATCVLLARRI VMKKRAKKKG 1301: TDAEQIFKRV EALAGGSREK LKELPLFEFQ VLATATDNFS LSNKLGQGGF GPVYKGMLLE GQEIAVKRLS QASGQGLEEL VTEVVVISKL QHRNLVKLFG 1401: CCIAGEERML VYEFMPKKSL DFYIFDPREA KLLDWNTRFE IINGICRGLL YLHRDSRLRI IHRDLKASNI LLDENLIPKI SDFGLARIFP GNEDEANTRR 1501: VVGTYGYMAP EYAMGGLFSE KSDVFSLGVI LLEIISGRRN SHSTLLAHVW SIWNEGEING MVDPEIFDQL FEKEIRKCVH IALLCVQDAA NDRPSVSTVC 1601: MMLSSEVADI PEPKQPAFMP RNVGLEAEFS ESIALKASIN NVTITDVSGR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)