AT1G08410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G27200.1); Has 7267 Blast hits to 7158 proteins in 1932 species: Archae - 109; Bacteria - 4700; Metazoa - 622; Fungi - 502; Plants - 285; Viruses - 0; Other Eukaryotes - 1049 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:2646307..2649106 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66746.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.60 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 589 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKSEKTSLG RSLVKHHNHM IQESKDKGKY YKNLQKKVLE SVTEVSDIDA IIEQAEEAER LYTINHSSST PLSINLDTNS SSSVIAAEEW REQQKIEEAL 101: HASSLQVPRR PPWTPEMSVE ELDANEKQAF LNWRRMLVSL EENEKLVLTP FEKNLDIWRQ LWRVLERSDL IVMVVDARDP LFYRCPDLEA YAQEIDEHKK 201: IMLLVNKADL LPTDVREKWA EYFRLNNILF VFWSAIAATA TLEGKVLKEQ WRQPDNLQKT DDPDIMIYGR DELLSRLQFE AQEIVKVRNS RAASVSSQSW 301: TGEYQRDQAV VGFVGYPNVG KSSTINALVG QKRTGVTSTP GKTKHFQTLI ISDELMLCDC PGLVFPSFSS SRYEMIASGV LPIDRMTEHR EAIQVVADKV 401: PRRVIESVYN ISLPKPKTYE RQSRPPHAAE LLKSYCASRG YVASSGLPDE TKAARLILKD YIGGKLPHYA MPPGMPQADE PDIEDTQELE DILEGSESDD 501: SAVGDETENE QVPGIDDVLD DLSSFDLANG LKSSKKVTAK KQTASHKQHK KPQRKKDRTW RVQNTEDGDG MPSVKVFQKP ANTGPLTMR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)